I am not an ecologist and i dont know the shannon wiener index and dont remember by heart the definition of the simpsons index. Maximum species evenness was recorded for cyanophyceae and minimum for bacillariophyceae. First, enter the number of species, and then enter the name you wish to give the species, if available, and the given populations for each of the speciesin any given order. Measuring diversity has been of historical significance and due to the obvious declines in habitat diversity this data is still valuable. Key wordsdiversity indices, shannon index, shannon wiener index, shannonweaver index, species richness, species diversity. Apr 11, 2003 on some occasions it is called the shannonwiener index and on other occasions it is called the shannonweaver index. The shannon index is a measurement used to compare diversity between habitat samples. Diversity, security, and adaptability in energy systems. Proceedings of the 27th workshopconference of the association for biology laboratory education able, 383 pages. The methods on offer range from the familiar, such as the calculation of various diversity indices and the fitting of common distributions, to more recentlydeveloped techniques such as total species complement estimators. Species diversity and richness 4 is designed for professional ecologists and their students.
Calculate the shannon diversity index and evenness for these sample values. The addition of rare species to a sample causes only small changes in the value of d shannon wiener index also been called the shannon index and the shannon weaver index. Used to compare diversity, doesnt give a measure of dominance. Species diversity, abundance and distribution of fish. This is the simplest of all the measures of species diversity.
Species diversity considers both the number of species richness in the community and their relative abundance evenness or equability. Type ii indices are most sensitive to changes in the more. C the more species you have, the more diverse the area. Sample values s 60,10,25,1,4 number of species n 5. We will then consider one measure used to compare diversity among communities, jaccard. Statistics shannon wiener diversity index tutorialspoint. The proportion of species i relative to the total number of species p i is calculated, and then multiplied by the natural logarithm of this proportion lnp i. I have only seen it used for species diversity measure. It assumed that individuals are randomly sampled from an infinitely large community, and that all species are represented in the sample. Now from the alpha diversity tab choose the shannon wiener test we could.
Shannons diversity index real statistics using excel. Dpsi log pi, where s is the total number of species in the sample, i is the total number of individuals in. Species diversity species diversity differs from species richness in that it takes into account both the numbers of species present and the dominance or evenness of species in relation to one another. The shannonwiener diversity index is one measure that we will use to. The shannon weiner index was considered to be the most satisfactory measure of energy diversity because it incorporates the concepts of variety and balance 4. Diversity index, one of shannon, simpson or invsimpson. Natural resource biometrics measures of diversity shannon. B based on the species richness the number of species present and species abundance the number of individuals per species.
However, when each representative group was considered as input data, the index resulted 3. To do this, the proportion of each species of the total is calculated, the natural log of each is determined, and then multiplied by the proportion. A tribute to claude shannon 19162001 and a plea for more. A tribute to claude shannon 19162001 and a plea for more rigorous use of species richness, species diversity and the shannon wiener index. We suggest an explanation for this dual use of terms and in so doing we offer a tribute to the late claude shannon who passed away on 24 february 2001. Instead we use a measure of the distribution of observations among the categories.
Based on shannon wiener diversity index, the mannwhitney u test showed a significant difference between the two habitats u 2. Regarding your result, a shannon wiener diversity index of 2. Application of shannons index to study diversity with. We suggest that at the very least, authors should define. A tribute to claude shannon 19162001 and a plea for. The maximum diversity hmax of a sample is found when all species are equally abundant.
The index is most often used for ecological studies that measure species diversity, but the same analysis can also be applied to other principles, such. The shannon weiner diversity index of three different sampling indicated a strong relationship with overall species richness, showed variation and ranged from 0. Shannon weiner index assumes that individuals are randomly sampled from an independent large population and all the species are represented in the sample. The shannonwiener index is an example of a type i index, like brillouins index. Distribution, diversity and ecology of spider species at two different habitats mithali mahesh halarnkar and ik pai department of zoology, goa university, india submission. Introduction ondo state is located in south western nigeria and has coastal areas estimated to be about. The shannonweiner species diversity index association for.
Measurements of biodiversity marinespecies introduced. The shannon diversity index h is another index that is commonly used to characterize species diversity in a community. In this article, a link is noted between a common family of diversity indices and non. Species and biological diversity choices of diversity indices and. As a measure of species diversity, we will calculate the shannon index, h. The shannon weiner value h can range from no diversity at 0. Shannon index the idea behind this index is that the diversity of a community is similar to the amount of information in a code or message. Shannon wiener index of diversity published on by oxford university press. Margalefs diversity index, sorensens index, number of occurrence index noi, shannonwiener index, pielous measure of evenness and berger parker dominance index. A a diversity index is a mathematical measure of species diversity in a given community. Shannon weiner index the shannon index is affected by both the number of species and their equitability, or evenness. Jan 06, 2011 demonstration of how to calculate the shannon wiener diversity index in microsoft excel. Pages 334338, in tested studies for laboratory teaching, volume 27 m. Species richness, diversity and abundance of some decapod.
Shannon wiener index biodiversity studies pdf species diversity of ecological communities is complicated. In this study, we also use the shannon wiener index to calculatethe diversity of energy consumption and industry sector. Shannon wiener index of diversity information index a measure used by ecologists when a system contains too many individuals for each to be identified and examined. Pdf on jan 1, 2006, kathleen a nolan and others published beachcomber biology. Maximum and minimum species diversity shannon weiner h were found 2. It is different from species richness in that unlike richness it also shows community composition and takes into account the relative abundance of species that are present in the community. Species and biological diversity choices of diversity. Species diversity concepts describing communities species. This makes the shannon index and the simpson diversity or gini coefficient special cases of a more general index. Shannon index shannonweaver index h a diversity index is the measure of species diversity in a given community. Dominance indices are weighted toward the abundance of the commonest species. The actual formula for the shannon weiner diversity index is. Diversity, population structure, and above ground biomass in.
The shannon weiner index is most sensitive to the number of species in a sample, so it is usually considered to be biased toward measuring species richness. The most widely used diversity index in the ecological literature is the shannon wiener diversity index. The shannon wiener diversity index is one measure that we will use to try to draw information from samples in the field. First, let us calculate the sum of the given values. This tutorial explains how to calculate the shannon wiener diversity index and evenness. However, if you were to include the definitions of those indices, i and others might be able to answer without having to search the literature for those definitions. A diversity index is a mathematical measure of species diversity in a community. Brief outlines of the two types of diversity indices of biodiversity are discussed in this article.
Application of shannons index to study diversity with reference to. The shannonweiner species diversity index find, read and cite all the. Equitability assumes a value between 0 and 1 with 1 being complete evenness. The diversity, structure, species composition, and above ground biomass of woody plants on ngomakurira mountain in zimbabwe were studied. The most common measures of biodiversity are species richness, simpsons index and shannon wiener index. In fact, in the late 1940s shannon had built on the work of wiener. The shannon index has been a popular diversity index in the ecological literature, where it is also known as shannons diversity index, the shannonwiener index, the shannonweaver index and the shannon entropy.
How to calculate shannon wiener diversity index definition. Shannon wiener index of diversity oxford reference. In particular, for a random sample, we can use shannons index of diversity aka as shannonweiners index, which is. Online biodiversity calculator which helps to calculates the shannon s diversity index and evenness from the given sample data. Sample values s 60,10,25,1,4 number of species n 5 first, let us calculate the sum of the given values. The actual formula for the shannonweiner diversity index is. Values of the shannon diversity index for real communities typically fall between 1. Key wordsdiversity indices, shannon index, shannon wiener index, shannon weaver index, species richness, species diversity. Like simpsons index, shannon s index accounts for both abundance and evenness of the species present. Prediction of the shannon wiener diversity index from trace element profiles in sediments around the statfjord platforms. What is the correct name for the biodiversity index. Shannon wiener species diversity index formula data analysis.
A greater number of species and a more even distribution both increase diversity as measured by h. The shannon index is a popular diversity index in ecology taking into account the number of species as well as the evenness of species how close in numbers each species in an environment are. A measure derived from information theories that were developed by claude elwood shannon 19162001 and norbert wiener. The shannon weiner diversity index is a common way of showing that diversity involves not only numbers of different species, but also how well each of these species is represented in different habitats. However, density is the most commonly used variable to assess plant diversity, therefore the examples in this module will be based on density. A widely used dominance index is simpsons diversity index. The shannon index has been a popular diversity index in the ecological. If i obtain the shannonweiner diversity index as 2. A measure used by ecologists when a system contains too many individuals for each to be identified and examined. Distribution, diversity and ecology of spider species at. Shannonwiener index h most commonly used index of diversity in ecological studies. Simpson diversity and the shannon wiener index as special cases of a generalized entropy. Biodiversity calculator for the simpson and shannon indexes.
Posted on 201021 20170904 author bpmsg categories online tools, other articles tags berger parker, calculation, excel, shannon entropy, shannon weaver index, shannonwiener index, simpson index diversity as business kpi alpha and beta diversity. Simpsons diversity indexis used to calculate a measure of diversity, taking into account the number of something as well as its abundance. For categorical data, there is no mean or median and so the measures of variation described in measures of variability cant be used. Simpson diversity and the shannonwiener index as special. A systematic random sampling approach was adopted to establish 52 sampling plots measuring 10. A diversity index also called phylogenetic or simpsons diversity index is a quantitative measure that reflects how many different types such as species there are in a dataset a community and that can simultaneously take into account the phylogenetic relations among the individuals distributed among those types, such as richness, divergence or evenness. Diversity of bacterial endophytes in 3 and 15 yearold. Simpson index must also be calculated for this will give you a general idea regarding dominance. Species richness, diversity and abundance of some decapod crustaceans in coastal waters of ondo state, south west, nigeria.
This diversity measure is based on information theory. View enhanced pdf access article on wiley online library html view download pdf for offline viewing. Statistics shannon wiener diversity index in the literature, the terms species richness and species diversity are sometimes used interchangeably. This comparison can be between two different habitats or a comparison of one habitat over time. In particular, for a random sample, we can use shannon s index of diversity aka as shannon weiner s index, which is. Pdf prediction of the shannon wiener diversity index. Diversity indices that combine both richness and abundance i. The shannon index has been a popular diversity index in. The shannonwiener diversity index, calculated by using the abundance of each genus in the community, was 2. Pdf application of shannons index to study diversity with. Aug 28, 2014 in analyses using only one diversity index, similar significant effects of lui would have been detected using any of the indices we included, except e.
But what else is the shannon index used for michael. Lets compute the shannonweiner diversity index for the same hypothetical community in the previous example. Shannonwiener index of diversity information index source. The highest fish diversity was recorded at siteiii followed by sitesii and i. For our uses, this order could be characterized by the number of species andor the number of individuals in each species, within our sample plot. I have calculated the shannon weiner diversity for coral species and have obtained 2. Diversity indices provide more information about community composition than simply species richness i. Phytoplankton community structure and species diversity of. All you do is count of the number of species found in a community e.
Pdf a comparative study of fish assemblage and diversity. A diversity index is the measure of species diversity in a given community. Shannon index is a commonly used diversity index that takes into account. Diversity or dominance can be calculated with density, cover, or biomass. Lets compute the shannon weiner diversity index for the same hypothetical community in the previous example.
This calculator is free to use and is designed for biologists, ecologists, teachers, and students needing to quickly calculate the biodiversity indexes of an ecosystem. Jan 26, 2012 a diversity index is the measure of species diversity in a given community. Thus, when conducting simple statistical analyses of a specific effect of disturbance on diversity, the choice of index does not appear particularly important. Shannon, simpson, and fisher diversity indices and species richness. Here, we will explore two measures of biodiversity. The shannonweiner index is most sensitive to the number of species in a sample, so it is usually considered to be biased toward measuring species richness. In order for an economy to withstand supply and demand shocks, it must either maintain its competitive advantage or have enough variety of industries to reemploy displaced workers malizia and ke, 1993. This measure of equitability compares the observed shannonwiener index against. Many indices for measuring species diversity have been proposed.
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